| 1 | /* $Id$ $Revision$ */ |
| 2 | /* vim:set shiftwidth=4 ts=8: */ |
| 3 | |
| 4 | /************************************************************************* |
| 5 | * Copyright (c) 2011 AT&T Intellectual Property |
| 6 | * All rights reserved. This program and the accompanying materials |
| 7 | * are made available under the terms of the Eclipse Public License v1.0 |
| 8 | * which accompanies this distribution, and is available at |
| 9 | * http://www.eclipse.org/legal/epl-v10.html |
| 10 | * |
| 11 | * Contributors: See CVS logs. Details at http://www.graphviz.org/ |
| 12 | *************************************************************************/ |
| 13 | |
| 14 | |
| 15 | /* |
| 16 | * Written by Stephen North |
| 17 | * Updated by Emden Gansner |
| 18 | */ |
| 19 | |
| 20 | #include "config.h" |
| 21 | |
| 22 | #include <ctype.h> |
| 23 | #include <stdlib.h> |
| 24 | #include "cgraph.h" |
| 25 | |
| 26 | #define N_NEW(n,t) (t*)malloc((n)*sizeof(t)) |
| 27 | #define NEW(t) (t*)malloc(sizeof(t)) |
| 28 | |
| 29 | typedef struct { |
| 30 | Agrec_t h; |
| 31 | char cc_subg; /* true iff subgraph corresponds to a component */ |
| 32 | } Agraphinfo_t; |
| 33 | |
| 34 | typedef struct { |
| 35 | Agrec_t h; |
| 36 | char mark; |
| 37 | Agobj_t* ptr; |
| 38 | } Agnodeinfo_t; |
| 39 | |
| 40 | #define GD_cc_subg(g) (((Agraphinfo_t*)(g->base.data))->cc_subg) |
| 41 | #define ND_mark(n) (((Agnodeinfo_t*)(n->base.data))->mark) |
| 42 | #define ND_ptr(n) (((Agnodeinfo_t*)(n->base.data))->ptr) |
| 43 | #define ND_dn(n) ((Agnode_t*)ND_ptr(n)) |
| 44 | #define ND_clust(n) ((Agraph_t*)ND_ptr(n)) |
| 45 | #define agfindnode(G,N) (agnode(G, N, 0)) |
| 46 | |
| 47 | #include <getopt.h> |
| 48 | |
| 49 | #ifdef HAVE_UNISTD_H |
| 50 | #include <unistd.h> |
| 51 | #endif |
| 52 | #include <string.h> |
| 53 | #include "ingraphs.h" |
| 54 | |
| 55 | /* internals of libgraph */ |
| 56 | #define TAG_NODE 1 |
| 57 | |
| 58 | #define INTERNAL 0 /* Basically means all components need to be |
| 59 | * generated before output |
| 60 | */ |
| 61 | #define EXTERNAL 1 |
| 62 | #define SILENT 2 |
| 63 | #define 3 |
| 64 | |
| 65 | #define BY_INDEX 1 |
| 66 | #define BY_SIZE 2 |
| 67 | |
| 68 | char* Cmd; |
| 69 | char **Files; |
| 70 | int verbose; |
| 71 | int printMode = INTERNAL; |
| 72 | int useClusters = 0; |
| 73 | int doEdges = 1; /* induce edges */ |
| 74 | int doAll = 1; /* induce subgraphs */ |
| 75 | char *suffix = 0; |
| 76 | char *outfile = 0; |
| 77 | char *path = 0; |
| 78 | int sufcnt = 0; |
| 79 | int sorted = 0; |
| 80 | int sortIndex = 0; |
| 81 | int sortFinal; |
| 82 | int x_index = -1; |
| 83 | int x_final = -1; /* require 0 <= x_index <= x_final or x_final= -1 */ |
| 84 | int x_mode; |
| 85 | char *x_node; |
| 86 | |
| 87 | static char *useString = |
| 88 | "Usage: ccomps [-svenCx?] [-X[#%]s[-f]] [-o<out template>] <files>\n\ |
| 89 | -s - silent\n\ |
| 90 | -x - external\n\ |
| 91 | -X - extract component\n\ |
| 92 | -C - use clusters\n\ |
| 93 | -e - do not induce edges\n\ |
| 94 | -n - do not induce subgraphs\n\ |
| 95 | -v - verbose\n\ |
| 96 | -o - output file template\n\ |
| 97 | -z - sort by size, largest first\n\ |
| 98 | -? - print usage\n\ |
| 99 | If no files are specified, stdin is used\n" ; |
| 100 | |
| 101 | static void usage(int v) |
| 102 | { |
| 103 | printf("%s" ,useString); |
| 104 | exit(v); |
| 105 | } |
| 106 | |
| 107 | static void split(char *name) |
| 108 | { |
| 109 | char *sfx = 0; |
| 110 | int size; |
| 111 | |
| 112 | sfx = strrchr(name, '.'); |
| 113 | if (sfx) { |
| 114 | suffix = sfx + 1; |
| 115 | size = sfx - name; |
| 116 | path = (char *) malloc(size + 1); |
| 117 | strncpy(path, name, size); |
| 118 | *(path + size) = '\0'; |
| 119 | } else { |
| 120 | path = name; |
| 121 | } |
| 122 | } |
| 123 | |
| 124 | /* isCluster: |
| 125 | * Return true if graph is a cluster |
| 126 | */ |
| 127 | static int isCluster(Agraph_t * g) |
| 128 | { |
| 129 | return (strncmp(agnameof(g), "cluster" , 7) == 0); |
| 130 | } |
| 131 | |
| 132 | static void init(int argc, char *argv[]) |
| 133 | { |
| 134 | int c; |
| 135 | char* endp; |
| 136 | |
| 137 | Cmd = argv[0]; |
| 138 | opterr = 0; |
| 139 | while ((c = getopt(argc, argv, ":zo:xCX:nesv" )) != -1) { |
| 140 | switch (c) { |
| 141 | case 'o': |
| 142 | outfile = optarg; |
| 143 | split(outfile); |
| 144 | break; |
| 145 | case 'C': |
| 146 | useClusters = 1; |
| 147 | break; |
| 148 | case 'e': |
| 149 | doEdges = 0; |
| 150 | break; |
| 151 | case 'n': |
| 152 | doAll = 0; |
| 153 | break; |
| 154 | case 'x': |
| 155 | printMode = EXTERNAL; |
| 156 | break; |
| 157 | case 's': |
| 158 | printMode = SILENT; |
| 159 | break; |
| 160 | case 'X': |
| 161 | if ((*optarg == '#') || (*optarg == '%')) { |
| 162 | char *p = optarg + 1; |
| 163 | if (*optarg == '#') x_mode = BY_INDEX; |
| 164 | else x_mode = BY_SIZE; |
| 165 | if (isdigit(*p)) { |
| 166 | x_index = (int)strtol (p, &endp, 10); |
| 167 | printMode = EXTRACT; |
| 168 | if (*endp == '-') { |
| 169 | p = endp + 1; |
| 170 | if (isdigit(*p)) { |
| 171 | x_final = atoi (p); |
| 172 | if (x_final < x_index) { |
| 173 | printMode = INTERNAL; |
| 174 | fprintf(stderr, |
| 175 | "ccomps: final index %d < start index %d in -X%s flag - ignored\n" , |
| 176 | x_final, x_index, optarg); |
| 177 | } |
| 178 | } |
| 179 | else if (*p) { |
| 180 | printMode = INTERNAL; |
| 181 | fprintf(stderr, |
| 182 | "ccomps: number expected in -X%s flag - ignored\n" , |
| 183 | optarg); |
| 184 | } |
| 185 | } |
| 186 | else |
| 187 | x_final = x_index; |
| 188 | } else |
| 189 | fprintf(stderr, |
| 190 | "ccomps: number expected in -X%s flag - ignored\n" , |
| 191 | optarg); |
| 192 | } else { |
| 193 | x_node = optarg; |
| 194 | printMode = EXTRACT; |
| 195 | } |
| 196 | break; |
| 197 | case 'v': |
| 198 | verbose = 1; |
| 199 | break; |
| 200 | case 'z': |
| 201 | sorted = 1; |
| 202 | break; |
| 203 | case ':': |
| 204 | fprintf(stderr, |
| 205 | "ccomps: option -%c missing argument - ignored\n" , optopt); |
| 206 | break; |
| 207 | case '?': |
| 208 | if (optopt == '?') |
| 209 | usage(0); |
| 210 | else |
| 211 | fprintf(stderr, |
| 212 | "ccomps: option -%c unrecognized - ignored\n" , optopt); |
| 213 | break; |
| 214 | } |
| 215 | } |
| 216 | argv += optind; |
| 217 | argc -= optind; |
| 218 | |
| 219 | if (sorted) { |
| 220 | if ((printMode == EXTRACT) && (x_index >= 0)) { |
| 221 | printMode = INTERNAL; |
| 222 | sortIndex = x_index; |
| 223 | sortFinal = x_final; |
| 224 | } |
| 225 | else if (printMode == EXTERNAL) { |
| 226 | sortIndex = -1; |
| 227 | printMode = INTERNAL; |
| 228 | } |
| 229 | else |
| 230 | sorted = 0; /* not relevant; turn off */ |
| 231 | } |
| 232 | if (argc > 0) |
| 233 | Files = argv; |
| 234 | } |
| 235 | |
| 236 | typedef struct blk_t { |
| 237 | Agnode_t **data; |
| 238 | Agnode_t **endp; |
| 239 | struct blk_t *prev; |
| 240 | struct blk_t *next; |
| 241 | } blk_t; |
| 242 | |
| 243 | typedef struct { |
| 244 | blk_t *fstblk; |
| 245 | blk_t *curblk; |
| 246 | Agnode_t **curp; |
| 247 | } stk_t; |
| 248 | |
| 249 | |
| 250 | #define SMALLBUF 1024 |
| 251 | #define BIGBUF 1000000 |
| 252 | |
| 253 | static Agnode_t *base[SMALLBUF]; |
| 254 | static blk_t Blk; |
| 255 | static stk_t Stk; |
| 256 | |
| 257 | static void initStk(void) |
| 258 | { |
| 259 | Blk.data = base; |
| 260 | Blk.endp = Blk.data + SMALLBUF; |
| 261 | Stk.curblk = Stk.fstblk = &Blk; |
| 262 | Stk.curp = Stk.curblk->data; |
| 263 | } |
| 264 | |
| 265 | static void push(Agnode_t * np) |
| 266 | { |
| 267 | if (Stk.curp == Stk.curblk->endp) { |
| 268 | if (Stk.curblk->next == NULL) { |
| 269 | blk_t *bp = NEW(blk_t); |
| 270 | if (bp == 0) { |
| 271 | fprintf(stderr, "gc: Out of memory\n" ); |
| 272 | exit(1); |
| 273 | } |
| 274 | bp->prev = Stk.curblk; |
| 275 | bp->next = NULL; |
| 276 | bp->data = N_NEW(BIGBUF, Agnode_t *); |
| 277 | if (bp->data == 0) { |
| 278 | fprintf(stderr, "%s: Out of memory\n" , Cmd); |
| 279 | exit(1); |
| 280 | } |
| 281 | bp->endp = bp->data + BIGBUF; |
| 282 | Stk.curblk->next = bp; |
| 283 | } |
| 284 | Stk.curblk = Stk.curblk->next; |
| 285 | Stk.curp = Stk.curblk->data; |
| 286 | } |
| 287 | ND_mark(np) = -1; |
| 288 | *Stk.curp++ = np; |
| 289 | } |
| 290 | |
| 291 | static Agnode_t *pop(void) |
| 292 | { |
| 293 | if (Stk.curp == Stk.curblk->data) { |
| 294 | if (Stk.curblk == Stk.fstblk) |
| 295 | return 0; |
| 296 | Stk.curblk = Stk.curblk->prev; |
| 297 | Stk.curp = Stk.curblk->endp; |
| 298 | } |
| 299 | Stk.curp--; |
| 300 | return *Stk.curp; |
| 301 | } |
| 302 | |
| 303 | static int dfs(Agraph_t * g, Agnode_t * n, Agraph_t * out) |
| 304 | { |
| 305 | Agedge_t *e; |
| 306 | Agnode_t *other; |
| 307 | int cnt = 0; |
| 308 | |
| 309 | push(n); |
| 310 | while ((n = pop())) { |
| 311 | ND_mark(n) = 1; |
| 312 | cnt++; |
| 313 | agsubnode(out, n, 1); |
| 314 | for (e = agfstedge(g, n); e; e = agnxtedge(g, e, n)) { |
| 315 | if ((other = agtail(e)) == n) |
| 316 | other = aghead(e); |
| 317 | if (ND_mark(other) == 0) |
| 318 | push (other); |
| 319 | } |
| 320 | } |
| 321 | return cnt; |
| 322 | } |
| 323 | |
| 324 | /* nodeInduce: |
| 325 | * Using the edge set of eg, add to g any edges |
| 326 | * with both endpoints in g. |
| 327 | */ |
| 328 | static int nodeInduce(Agraph_t * g, Agraph_t * eg) |
| 329 | { |
| 330 | Agnode_t *n; |
| 331 | Agedge_t *e; |
| 332 | int e_cnt = 0; |
| 333 | |
| 334 | for (n = agfstnode(g); n; n = agnxtnode(g, n)) { |
| 335 | for (e = agfstout(eg, n); e; e = agnxtout(eg, e)) { |
| 336 | if (agsubnode(g, aghead(e), 0)) { |
| 337 | agsubedge(g, e, 1); |
| 338 | e_cnt++; |
| 339 | } |
| 340 | } |
| 341 | } |
| 342 | return e_cnt; |
| 343 | } |
| 344 | |
| 345 | static char *getName(void) |
| 346 | { |
| 347 | char *name; |
| 348 | static char *buf = 0; |
| 349 | |
| 350 | if (sufcnt == 0) |
| 351 | name = outfile; |
| 352 | else { |
| 353 | if (!buf) |
| 354 | buf = (char *) malloc(strlen(outfile) + 20); /* enough to handle '_number' */ |
| 355 | if (suffix) |
| 356 | sprintf(buf, "%s_%d.%s" , path, sufcnt, suffix); |
| 357 | else |
| 358 | sprintf(buf, "%s_%d" , path, sufcnt); |
| 359 | name = buf; |
| 360 | } |
| 361 | sufcnt++; |
| 362 | return name; |
| 363 | } |
| 364 | |
| 365 | static void gwrite(Agraph_t * g) |
| 366 | { |
| 367 | FILE *outf; |
| 368 | char *name; |
| 369 | |
| 370 | if (!outfile) { |
| 371 | agwrite(g, stdout); |
| 372 | fflush(stdout); |
| 373 | } else { |
| 374 | name = getName(); |
| 375 | outf = fopen(name, "w" ); |
| 376 | if (!outf) { |
| 377 | fprintf(stderr, "Could not open %s for writing\n" , name); |
| 378 | perror("ccomps" ); |
| 379 | } |
| 380 | agwrite(g, outf); |
| 381 | fflush(outf); |
| 382 | fclose(outf); |
| 383 | } |
| 384 | } |
| 385 | |
| 386 | /* getBuf |
| 387 | * Return pointer to buffer containing at least n bytes. |
| 388 | * Non-reentrant. |
| 389 | */ |
| 390 | static char *getBuf(int n) |
| 391 | { |
| 392 | static int len = 0; |
| 393 | static char *buf = 0; |
| 394 | int sz; |
| 395 | |
| 396 | if (n > len) { |
| 397 | sz = n + 100; |
| 398 | if (len == 0) |
| 399 | buf = (char *) malloc(sz); |
| 400 | else |
| 401 | buf = (char *) realloc(buf, sz); |
| 402 | len = sz; |
| 403 | } |
| 404 | return buf; |
| 405 | } |
| 406 | |
| 407 | /* projectG: |
| 408 | * If any nodes of subg are in g, create a subgraph of g |
| 409 | * and fill it with all nodes of subg in g and their induced |
| 410 | * edges in subg. Copy the attributes of subg to g. Return the subgraph. |
| 411 | * If not, return null. |
| 412 | */ |
| 413 | static Agraph_t *projectG(Agraph_t * subg, Agraph_t * g, int inCluster) |
| 414 | { |
| 415 | Agraph_t *proj = 0; |
| 416 | Agnode_t *n; |
| 417 | Agnode_t *m; |
| 418 | |
| 419 | for (n = agfstnode(subg); n; n = agnxtnode(subg, n)) { |
| 420 | if ((m = agfindnode(g, agnameof(n)))) { |
| 421 | if (proj == 0) { |
| 422 | proj = agsubg(g, agnameof(subg), 1); |
| 423 | } |
| 424 | agsubnode(proj, m, 1); |
| 425 | } |
| 426 | } |
| 427 | if (!proj && inCluster) { |
| 428 | proj = agsubg(g, agnameof(subg), 1); |
| 429 | } |
| 430 | if (proj) { |
| 431 | if (doEdges) nodeInduce(proj, subg); |
| 432 | agcopyattr(subg, proj); |
| 433 | } |
| 434 | |
| 435 | return proj; |
| 436 | } |
| 437 | |
| 438 | /* subgInduce: |
| 439 | * Project subgraphs of root graph on subgraph. |
| 440 | * If non-empty, add to subgraph. |
| 441 | */ |
| 442 | static void |
| 443 | subgInduce(Agraph_t * root, Agraph_t * g, int inCluster) |
| 444 | { |
| 445 | Agraph_t *subg; |
| 446 | Agraph_t *proj; |
| 447 | int in_cluster; |
| 448 | |
| 449 | /* fprintf (stderr, "subgInduce %s inCluster %d\n", agnameof(root), inCluster); */ |
| 450 | for (subg = agfstsubg(root); subg; subg = agnxtsubg(subg)) { |
| 451 | if (GD_cc_subg(subg)) |
| 452 | continue; |
| 453 | if ((proj = projectG(subg, g, inCluster))) { |
| 454 | in_cluster = inCluster || (useClusters && isCluster(subg)); |
| 455 | subgInduce(subg, proj, in_cluster); |
| 456 | } |
| 457 | } |
| 458 | } |
| 459 | |
| 460 | static void |
| 461 | subGInduce(Agraph_t* g, Agraph_t * out) |
| 462 | { |
| 463 | subgInduce(g, out, 0); |
| 464 | } |
| 465 | |
| 466 | #define PFX1 "%s_cc" |
| 467 | #define PFX2 "%s_cc_%ld" |
| 468 | |
| 469 | /* deriveClusters: |
| 470 | * Construct nodes in derived graph corresponding top-level clusters. |
| 471 | * Since a cluster might be wrapped in a subgraph, we need to traverse |
| 472 | * down into the tree of subgraphs |
| 473 | */ |
| 474 | static void deriveClusters(Agraph_t* dg, Agraph_t * g) |
| 475 | { |
| 476 | Agraph_t *subg; |
| 477 | Agnode_t *dn; |
| 478 | Agnode_t *n; |
| 479 | |
| 480 | for (subg = agfstsubg(g); subg; subg = agnxtsubg(subg)) { |
| 481 | if (!strncmp(agnameof(subg), "cluster" , 7)) { |
| 482 | dn = agnode(dg, agnameof(subg), 1); |
| 483 | agbindrec (dn, "nodeinfo" , sizeof(Agnodeinfo_t), TRUE); |
| 484 | ND_ptr(dn) = (Agobj_t*)subg; |
| 485 | for (n = agfstnode(subg); n; n = agnxtnode(subg, n)) { |
| 486 | if (ND_ptr(n)) { |
| 487 | fprintf (stderr, "Error: node \"%s\" belongs to two non-nested clusters \"%s\" and \"%s\"\n" , |
| 488 | agnameof (n), agnameof(subg), agnameof(ND_dn(n))); |
| 489 | } |
| 490 | ND_ptr(n) = (Agobj_t*)dn; |
| 491 | } |
| 492 | } |
| 493 | else { |
| 494 | deriveClusters (dg, subg); |
| 495 | } |
| 496 | } |
| 497 | } |
| 498 | |
| 499 | /* deriveGraph: |
| 500 | * Create derived graph dg of g where nodes correspond to top-level nodes |
| 501 | * or clusters, and there is an edge in dg if there is an edge in g |
| 502 | * between any nodes in the respective clusters. |
| 503 | */ |
| 504 | static Agraph_t *deriveGraph(Agraph_t * g) |
| 505 | { |
| 506 | Agraph_t *dg; |
| 507 | Agnode_t *dn; |
| 508 | Agnode_t *n; |
| 509 | |
| 510 | dg = agopen("dg" , Agstrictundirected, (Agdisc_t *) 0); |
| 511 | |
| 512 | deriveClusters (dg, g); |
| 513 | |
| 514 | for (n = agfstnode(g); n; n = agnxtnode(g, n)) { |
| 515 | if (ND_dn(n)) |
| 516 | continue; |
| 517 | dn = agnode(dg, agnameof(n), 1); |
| 518 | agbindrec (dn, "nodeinfo" , sizeof(Agnodeinfo_t), TRUE); |
| 519 | ND_ptr(dn) = (Agobj_t*)n; |
| 520 | ND_ptr(n) = (Agobj_t*)dn; |
| 521 | } |
| 522 | |
| 523 | for (n = agfstnode(g); n; n = agnxtnode(g, n)) { |
| 524 | Agedge_t *e; |
| 525 | Agnode_t *hd; |
| 526 | Agnode_t *tl = ND_dn(n); |
| 527 | for (e = agfstout(g, n); e; e = agnxtout(g, e)) { |
| 528 | hd = ND_dn(aghead(e)); |
| 529 | if (hd == tl) |
| 530 | continue; |
| 531 | if (hd > tl) |
| 532 | agedge(dg, tl, hd, 0, 1); |
| 533 | else |
| 534 | agedge(dg, hd, tl, 0, 1); |
| 535 | } |
| 536 | } |
| 537 | |
| 538 | return dg; |
| 539 | } |
| 540 | |
| 541 | /* unionNodes: |
| 542 | * Add all nodes in cluster nodes of dg to g |
| 543 | */ |
| 544 | static void unionNodes(Agraph_t * dg, Agraph_t * g) |
| 545 | { |
| 546 | Agnode_t *n; |
| 547 | Agnode_t *dn; |
| 548 | Agraph_t *clust; |
| 549 | |
| 550 | for (dn = agfstnode(dg); dn; dn = agnxtnode(dg, dn)) { |
| 551 | if (AGTYPE(ND_ptr(dn)) == AGNODE) { |
| 552 | agsubnode(g, ND_dn(dn), 1); |
| 553 | } else { |
| 554 | clust = ND_clust(dn); |
| 555 | for (n = agfstnode(clust); n; n = agnxtnode(clust, n)) |
| 556 | agsubnode(g, n, 1); |
| 557 | } |
| 558 | } |
| 559 | } |
| 560 | |
| 561 | typedef int (*qsort_cmpf) (const void *, const void *); |
| 562 | |
| 563 | static int cmp(Agraph_t** p0, Agraph_t** p1) |
| 564 | { |
| 565 | return (agnnodes(*p1) - agnnodes(*p0)); |
| 566 | } |
| 567 | |
| 568 | static void |
| 569 | printSorted (Agraph_t* root, int c_cnt) |
| 570 | { |
| 571 | Agraph_t** ccs = N_NEW(c_cnt, Agraph_t*); |
| 572 | Agraph_t* subg; |
| 573 | int i = 0, endi; |
| 574 | |
| 575 | for (subg = agfstsubg(root); subg; subg = agnxtsubg(subg)) { |
| 576 | if (GD_cc_subg(subg)) |
| 577 | ccs[i++] = subg; |
| 578 | } |
| 579 | /* sort by component size, largest first */ |
| 580 | qsort (ccs, c_cnt, sizeof(Agraph_t*), (qsort_cmpf)cmp); |
| 581 | |
| 582 | if (sortIndex >= 0) { |
| 583 | if (x_mode == BY_INDEX) { |
| 584 | if (sortIndex >= c_cnt) { |
| 585 | fprintf(stderr, |
| 586 | "ccomps: component %d not found in graph %s - ignored\n" , |
| 587 | sortIndex, agnameof(root)); |
| 588 | return; |
| 589 | } |
| 590 | if (sortFinal >= sortIndex) { |
| 591 | endi = sortFinal; |
| 592 | if (endi >= c_cnt) endi = c_cnt-1; |
| 593 | } |
| 594 | else |
| 595 | endi = c_cnt-1; |
| 596 | for (i = sortIndex; i <= endi ; i++) { |
| 597 | subg = ccs[i]; |
| 598 | if (doAll) |
| 599 | subGInduce(root, subg); |
| 600 | gwrite(subg); |
| 601 | } |
| 602 | } |
| 603 | else if (x_mode == BY_SIZE) { |
| 604 | if (sortFinal == -1) |
| 605 | sortFinal = agnnodes(ccs[0]); |
| 606 | for (i = 0; i < c_cnt ; i++) { |
| 607 | int sz; |
| 608 | subg = ccs[i]; |
| 609 | sz = agnnodes(subg); |
| 610 | if (sz > sortFinal) continue; |
| 611 | if (sz < sortIndex) break; |
| 612 | if (doAll) |
| 613 | subGInduce(root, subg); |
| 614 | gwrite(subg); |
| 615 | } |
| 616 | } |
| 617 | } |
| 618 | else for (i = 0; i < c_cnt; i++) { |
| 619 | subg = ccs[i]; |
| 620 | if (doAll) |
| 621 | subGInduce(root, subg); |
| 622 | gwrite(subg); |
| 623 | } |
| 624 | free (ccs); |
| 625 | } |
| 626 | |
| 627 | /* processClusters: |
| 628 | * Return 0 if graph is connected. |
| 629 | */ |
| 630 | static int processClusters(Agraph_t * g, char* graphName) |
| 631 | { |
| 632 | Agraph_t *dg; |
| 633 | long n_cnt, c_cnt, e_cnt; |
| 634 | char *name; |
| 635 | Agraph_t *out; |
| 636 | Agnode_t *n; |
| 637 | Agraph_t *dout; |
| 638 | Agnode_t *dn; |
| 639 | int = 0; |
| 640 | |
| 641 | dg = deriveGraph(g); |
| 642 | |
| 643 | if (x_node) { |
| 644 | n = agfindnode(g, x_node); |
| 645 | if (!n) { |
| 646 | fprintf(stderr, "ccomps: node %s not found in graph %s\n" , |
| 647 | x_node, agnameof(g)); |
| 648 | return 1; |
| 649 | } |
| 650 | name = getBuf(sizeof(PFX1) + strlen(graphName)); |
| 651 | sprintf(name, PFX1, graphName); |
| 652 | dout = agsubg(dg, name, 1); |
| 653 | out = agsubg(g, name, 1); |
| 654 | aginit(out, AGRAPH, "graphinfo" , sizeof(Agraphinfo_t), TRUE); |
| 655 | GD_cc_subg(out) = 1; |
| 656 | dn = ND_dn(n); |
| 657 | n_cnt = dfs(dg, dn, dout); |
| 658 | unionNodes(dout, out); |
| 659 | if (doEdges) |
| 660 | e_cnt = nodeInduce(out, out->root); |
| 661 | else |
| 662 | e_cnt = 0; |
| 663 | if (doAll) |
| 664 | subGInduce(g, out); |
| 665 | gwrite(out); |
| 666 | if (verbose) |
| 667 | fprintf(stderr, " %7ld nodes %7ld edges\n" , n_cnt, e_cnt); |
| 668 | return 0; |
| 669 | } |
| 670 | |
| 671 | c_cnt = 0; |
| 672 | for (dn = agfstnode(dg); dn; dn = agnxtnode(dg, dn)) { |
| 673 | if (ND_mark(dn)) |
| 674 | continue; |
| 675 | name = getBuf(sizeof(PFX2) + strlen(graphName) + 32); |
| 676 | sprintf(name, PFX2, graphName, c_cnt); |
| 677 | dout = agsubg(dg, name, 1); |
| 678 | out = agsubg(g, name, 1); |
| 679 | aginit(out, AGRAPH, "graphinfo" , sizeof(Agraphinfo_t), TRUE); |
| 680 | GD_cc_subg(out) = 1; |
| 681 | n_cnt = dfs(dg, dn, dout); |
| 682 | unionNodes(dout, out); |
| 683 | if (doEdges) |
| 684 | e_cnt = nodeInduce(out, out->root); |
| 685 | else |
| 686 | e_cnt = 0; |
| 687 | if (printMode == EXTERNAL) { |
| 688 | if (doAll) |
| 689 | subGInduce(g, out); |
| 690 | gwrite(out); |
| 691 | } else if (printMode == EXTRACT) { |
| 692 | if (x_mode == BY_INDEX) { |
| 693 | if (x_index <= c_cnt) { |
| 694 | extracted = 1; |
| 695 | if (doAll) |
| 696 | subGInduce(g, out); |
| 697 | gwrite(out); |
| 698 | if (c_cnt == x_final) |
| 699 | return 0; |
| 700 | } |
| 701 | } |
| 702 | else if (x_mode == BY_SIZE) { |
| 703 | int sz = agnnodes(out); |
| 704 | if ((x_index <= sz) && ((x_final == -1) || (sz <= x_final))) { |
| 705 | extracted = 1; |
| 706 | if (doAll) |
| 707 | subGInduce(g, out); |
| 708 | gwrite(out); |
| 709 | } |
| 710 | } |
| 711 | } |
| 712 | if (printMode != INTERNAL) |
| 713 | agdelete(g, out); |
| 714 | agdelete(dg, dout); |
| 715 | if (verbose) |
| 716 | fprintf(stderr, "(%4ld) %7ld nodes %7ld edges\n" , |
| 717 | c_cnt, n_cnt, e_cnt); |
| 718 | c_cnt++; |
| 719 | } |
| 720 | if ((printMode == EXTRACT) && !extracted && (x_mode == BY_INDEX)) { |
| 721 | fprintf(stderr, |
| 722 | "ccomps: component %d not found in graph %s - ignored\n" , |
| 723 | x_index, agnameof(g)); |
| 724 | return 1; |
| 725 | } |
| 726 | |
| 727 | if (sorted) |
| 728 | printSorted (g, c_cnt); |
| 729 | else if (printMode == INTERNAL) |
| 730 | gwrite(g); |
| 731 | |
| 732 | if (verbose) |
| 733 | fprintf(stderr, " %7d nodes %7d edges %7ld components %s\n" , |
| 734 | agnnodes(g), agnedges(g), c_cnt, agnameof(g)); |
| 735 | |
| 736 | agclose(dg); |
| 737 | |
| 738 | return (c_cnt ? 1 : 0); |
| 739 | } |
| 740 | |
| 741 | static void |
| 742 | bindGraphinfo (Agraph_t * g) |
| 743 | { |
| 744 | Agraph_t *subg; |
| 745 | |
| 746 | aginit(g, AGRAPH, "graphinfo" , sizeof(Agraphinfo_t), TRUE); |
| 747 | for (subg = agfstsubg(g); subg; subg = agnxtsubg(subg)) { |
| 748 | bindGraphinfo (subg); |
| 749 | } |
| 750 | } |
| 751 | |
| 752 | /* process: |
| 753 | * Return 0 if graph is connected. |
| 754 | */ |
| 755 | static int process(Agraph_t * g, char* graphName) |
| 756 | { |
| 757 | long n_cnt, c_cnt, e_cnt; |
| 758 | char *name; |
| 759 | Agraph_t *out; |
| 760 | Agnode_t *n; |
| 761 | int = 0; |
| 762 | |
| 763 | aginit(g, AGNODE, "nodeinfo" , sizeof(Agnodeinfo_t), TRUE); |
| 764 | bindGraphinfo (g); |
| 765 | initStk(); |
| 766 | |
| 767 | if (useClusters) |
| 768 | return processClusters(g, graphName); |
| 769 | |
| 770 | if (x_node) { |
| 771 | n = agfindnode(g, x_node); |
| 772 | if (!n) { |
| 773 | fprintf(stderr, |
| 774 | "ccomps: node %s not found in graph %s - ignored\n" , |
| 775 | x_node, agnameof(g)); |
| 776 | return 1; |
| 777 | } |
| 778 | name = getBuf(sizeof(PFX1) + strlen(graphName)); |
| 779 | sprintf(name, PFX1, graphName); |
| 780 | out = agsubg(g, name, 1); |
| 781 | aginit(out, AGRAPH, "graphinfo" , sizeof(Agraphinfo_t), TRUE); |
| 782 | GD_cc_subg(out) = 1; |
| 783 | n_cnt = dfs(g, n, out); |
| 784 | if (doEdges) |
| 785 | e_cnt = nodeInduce(out, out->root); |
| 786 | else |
| 787 | e_cnt = 0; |
| 788 | if (doAll) |
| 789 | subGInduce(g, out); |
| 790 | gwrite(out); |
| 791 | if (verbose) |
| 792 | fprintf(stderr, " %7ld nodes %7ld edges\n" , n_cnt, e_cnt); |
| 793 | return 0; |
| 794 | } |
| 795 | |
| 796 | c_cnt = 0; |
| 797 | for (n = agfstnode(g); n; n = agnxtnode(g, n)) { |
| 798 | if (ND_mark(n)) |
| 799 | continue; |
| 800 | name = getBuf(sizeof(PFX2) + strlen(graphName) + 32); |
| 801 | sprintf(name, PFX2, graphName, c_cnt); |
| 802 | out = agsubg(g, name, 1); |
| 803 | aginit(out, AGRAPH, "graphinfo" , sizeof(Agraphinfo_t), TRUE); |
| 804 | GD_cc_subg(out) = 1; |
| 805 | n_cnt = dfs(g, n, out); |
| 806 | if (doEdges) |
| 807 | e_cnt = nodeInduce(out, out->root); |
| 808 | else |
| 809 | e_cnt = 0; |
| 810 | if (printMode == EXTERNAL) { |
| 811 | if (doAll) |
| 812 | subGInduce(g, out); |
| 813 | gwrite(out); |
| 814 | } else if (printMode == EXTRACT) { |
| 815 | if (x_mode == BY_INDEX) { |
| 816 | if (x_index <= c_cnt) { |
| 817 | extracted = 1; |
| 818 | if (doAll) |
| 819 | subGInduce(g, out); |
| 820 | gwrite(out); |
| 821 | if (c_cnt == x_final) |
| 822 | return 0; |
| 823 | } |
| 824 | } |
| 825 | else if (x_mode == BY_SIZE) { |
| 826 | int sz = agnnodes(out); |
| 827 | if ((x_index <= sz) && ((x_final == -1) || (sz <= x_final))) { |
| 828 | extracted = 1; |
| 829 | if (doAll) |
| 830 | subGInduce(g, out); |
| 831 | gwrite(out); |
| 832 | } |
| 833 | } |
| 834 | } |
| 835 | if (printMode != INTERNAL) |
| 836 | agdelete(g, out); |
| 837 | if (verbose) |
| 838 | fprintf(stderr, "(%4ld) %7ld nodes %7ld edges\n" , |
| 839 | c_cnt, n_cnt, e_cnt); |
| 840 | c_cnt++; |
| 841 | } |
| 842 | if ((printMode == EXTRACT) && !extracted && (x_mode == BY_INDEX)) { |
| 843 | fprintf(stderr, |
| 844 | "ccomps: component %d not found in graph %s - ignored\n" , |
| 845 | x_index, agnameof(g)); |
| 846 | return 1; |
| 847 | } |
| 848 | |
| 849 | if (sorted) |
| 850 | printSorted (g, c_cnt); |
| 851 | else if (printMode == INTERNAL) |
| 852 | gwrite(g); |
| 853 | |
| 854 | if (verbose) |
| 855 | fprintf(stderr, " %7d nodes %7d edges %7ld components %s\n" , |
| 856 | agnnodes(g), agnedges(g), c_cnt, agnameof(g)); |
| 857 | return (c_cnt > 1); |
| 858 | } |
| 859 | |
| 860 | static Agraph_t *gread(FILE * fp) |
| 861 | { |
| 862 | return agread(fp, (Agdisc_t *) 0); |
| 863 | } |
| 864 | |
| 865 | /* chkGraphName: |
| 866 | * If the graph is anonymous, its name starts with '%'. |
| 867 | * If we use this as the prefix for subgraphs, they will not be |
| 868 | * emitted in agwrite() because cgraph assumes these were anonymous |
| 869 | * structural subgraphs all of whose properties are attached directly |
| 870 | * to the nodes and edges involved. |
| 871 | * |
| 872 | * This function checks for an initial '%' and if found, prepends '_' |
| 873 | * the the graph name. |
| 874 | * NB: static buffer is used. |
| 875 | */ |
| 876 | static char* |
| 877 | chkGraphName (Agraph_t* g) |
| 878 | { |
| 879 | static char* buf = NULL; |
| 880 | static int buflen = 0; |
| 881 | char* s = agnameof(g); |
| 882 | int len; |
| 883 | |
| 884 | if (*s != '%') return s; |
| 885 | len = strlen(s) + 2; /* plus '\0' and '_' */ |
| 886 | if (len > buflen) { |
| 887 | buf = realloc (buf, len); |
| 888 | buflen = len; |
| 889 | } |
| 890 | buf[0] = '_'; |
| 891 | strcpy (buf+1, s); |
| 892 | |
| 893 | return buf; |
| 894 | } |
| 895 | |
| 896 | int main(int argc, char *argv[]) |
| 897 | { |
| 898 | Agraph_t *g; |
| 899 | ingraph_state ig; |
| 900 | int r = 0; |
| 901 | init(argc, argv); |
| 902 | newIngraph(&ig, Files, gread); |
| 903 | |
| 904 | while ((g = nextGraph(&ig)) != 0) { |
| 905 | r += process(g, chkGraphName(g)); |
| 906 | agclose(g); |
| 907 | } |
| 908 | |
| 909 | return r; |
| 910 | } |
| 911 | |